BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C08SP1|AL427461
(981 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig843 1797 0.0
>3x_Contig843
Length = 3365
Score = 1797 bits (902), Expect = 0.0
Identities = 962/983 (97%), Gaps = 3/983 (0%)
Strand = Plus / Minus
Query: 1 atctttgaacttccttcactgtcaaagtagtaagacgaattaaaacgtgatttgaattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1493 atctttgaacttccttcactgtcaaagtagtaagacgaattaaaacgtgatttgaattat 1434
Query: 61 tttcaagcggaacgaaaaaaccactaagtatccagttcataatagcgactaaaggcactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1433 tttcaagcggaacgaaaaaaccactaagtatccagttcataatagcgactaaaggcactc 1374
Query: 121 caagatcacaaaaatccctgggctgccatatctatgtacactagacactcgtgctctata 180
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1373 caagatcagaaaaagccctgggctgccatatctatgtacactagacactcgtgctctata 1314
Query: 181 cggtcacctattcataggacataagtttctaagtttaawacacattcagtcacgtgtgtt 240
|||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||
Sbjct: 1313 cggtcacctattcataggacataagtttctaagtttaaaagacatttagtcacgtgtgta 1254
Query: 241 acrkatannttanaawwa-gaaacagcaagagtttctcagccactttgatgacgaatgct 299
|| | | | || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1253 acacgtgactgataaaaaagaaacagcaagagtttctcagccactttgatgacgaatgct 1194
Query: 300 cttcctcccttactgccaccccttcaacgcctcaaaatgccaccattacataactataac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 cttcctcccttactgccaccccttcaacgcctcaaaatgccaccattacataactataac 1134
Query: 360 tatcgattcacattattcccccacattatgaaatcccaaacaatgttttcagttacaata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 tatcgattcacattattcccccacattatgaaatcccaaacaatgttttcagttacaata 1074
Query: 420 gaaaaagctcagccaacaaattcttagccttaggccacaacgaaggacgcataaactgaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 gaaaaagctcagccaacaaattcttagccttaggccacaacgaaggacgcataaactgaa 1014
Query: 480 ttcctacctaattccatagccagacgaaaaacgtaccatctctcagtttctctcagtcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 ttcctacctaattccatagccagacgaaaaacgtaccatctctcagtttctctcagtcaa 954
Query: 540 gttaccgcatattttcgtgggtttaagtcacaagacggaccagttcccagcgtaggaacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 gttaccgcatattttcgtgggtttaagtcacaagacggaccagttcccagcgtaggaacc 894
Query: 600 tcacccatttcttttcggccctgctggcagtacgtccgatcagaaaatccaccataaaac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 tcacccatttcttttcggccctgctggcagtacgtccgatcagaaaatccaccataaaac 834
Query: 660 ggttacctttcaactggaaactctttattaccgaaactgttccttgccatattagttctt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ggttacctttcaactggaaactctttattaccgaaactgttccttgccatattagttctt 774
Query: 720 ttcttttcgaattgctttactaaatccgcagccatcttaaaatacgtaactctctgcaaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ttcttttcgaattgctttactaaatccgcagccatcttaaaatacgtaactctctgcaaa 714
Query: 780 ataaagtattaaatatatatacaaatatgtccatccattttgttgatagacgttaaatgc 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 713 ataaagtattaaatatatatacaaatatgtccatccattttgttgatagacgtt-aatgc 655
Query: 840 caactagtaaatcttgttaatcttgtgatgtttgatacttcatctagtcgataacttaag 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 caactagtaaatcttgttaatcttgtgatgtttgatacttcatctagtcgataacttaag 595
Query: 900 tagtggcaaggkattaagaggaatccaggcttaagccacccgctgtttattytctttgcc 959
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 594 tagtggcaaggtattaagaggaatccaggcttaagccacccgctgtttattctctttgcc 535
Query: 960 ttgtgg-ttttttcaggtttttt 981
|||||| ||||||||||||||||
Sbjct: 534 ttgtggtttttttcaggtttttt 512
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6272
Number of Sequences: 1807
Number of extensions: 6272
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 981
length of database: 10,358,551
effective HSP length: 16
effective length of query: 965
effective length of database: 10,329,639
effective search space: 9968101635
effective search space used: 9968101635
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)